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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.5G175300.1.p | ||||||||
Common Name | PRUPE_ppa026684mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 187aa MW: 21084.2 Da PI: 9.7196 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27 | 8.1e-09 | 15 | 66 | 6 | 54 |
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-..STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskK..lsKaeiLekAveYIksL 54 + +Er+RR ++++ ++L +l+P+ sk+++ K ls +A YIk+L Prupe.5G175300.1.p 15 KTVERNRRIHMKDLCFKLASLIPPqHSKPSNSKdtLSQQNQFDLASSYIKQL 66 679*********************77755555556999999999*****999 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 9.921 | 9 | 66 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.31E-9 | 13 | 83 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 8.5E-10 | 13 | 84 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 8.0E-6 | 15 | 66 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.13E-4 | 17 | 71 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence Send to blast |
MKKSSGESSS KLDRKTVERN RRIHMKDLCF KLASLIPPQH SKPSNSKDTL SQQNQFDLAS 60 SYIKQLRERI ENLKERKEKA MRSQLGIDAN STIDADNAMM VRSKLPVLEL RDSGSIIEVM 120 LISGLNKNFM LYEVISVLEE EGAEVISASF STIGDKVFHS LHAQVKISRV GVETSTVWQR 180 LQDLIY* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007208890.1 | 1e-135 | hypothetical protein PRUPE_ppa026684mg | ||||
TrEMBL | M5W8R3 | 1e-135 | M5W8R3_PRUPE; Uncharacterized protein | ||||
STRING | VIT_17s0000g08150.t01 | 6e-81 | (Vitis vinifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF6849 | 21 | 41 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G20970.1 | 2e-31 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Prupe.5G175300.1.p |
Entrez Gene | 18777808 |